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Now you can do the imports if you have not already (if you ran the scripts above afterward, make sure you restart eclipse)....
Then for each project, 'right-click->team->share project' ... to add the cvs-connection to the project. This just a litte less tedious than tedious-as-all-get-out. Small comfort is that the sakai-reference submodule cannot have a tomcat nature (since it has no java files, I am guessing).

Maven plugin

This seems a bit buggy but it still works. The bugginess is that 1) everytime you run maven, there is a 'launch' related error and a dialog, but say 'OK' and maven runs fine.... and, 2) certain project.xml files are misinterpreted as incorrectly formatted by the validator. The dav and dav-server submodules, for example, both are flagged as having invalid formats starting after the first nested tag (<pomVersion>).... where the <name> tag starts.